BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017F08SP1|AL427190
(964 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1415 1856 0.0
>3x_Contig1415
Length = 6436
Score = 1856 bits (935), Expect = 0.0
Identities = 959/965 (99%), Gaps = 2/965 (0%)
Strand = Plus / Minus
Query: 1 aaactatatcaatactacagaaatatccaaatcaagtctaaatctcttgttggttatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2648 aaactatatcaatactacagaaatatccaaatcaagtctaaatctcttgttggttatttt 2589
Query: 61 cttggatggcaggaagtttccaatgtaccaaatgcaactccgattcatttgatacatggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2588 cttggatggcaggaagtttccaatgtaccaaatgcaactccgattcatttgatacatggc 2529
Query: 121 gacaaggacacgatctgtgcagtggaaaagctagcacaatggcgcacattggaaggagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2528 gacaaggacacgatctgtgcagtggaaaagctagcacaatggcgcacattggaaggagtt 2469
Query: 181 actgtcacggtagatgtgatcaccgattgttcgcacaattgtttattagatgcaacagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2468 actgtcacggtagatgtgatcaccgattgttcgcacaattgtttattagatgcaacagaa 2409
Query: 241 gaaactctggagctaataatgaagtatacatgaacgtgaaaattggaggagtgaaaaagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2408 gaaactctggagctaataatgaagtatacatgaacgtgaaaattggaggagtgaaaaagt 2349
Query: 301 caaaagcagaatcaaatcagatgcacccaaaacgtttgagggatattattatctaacaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2348 caaaagcagaatcaaatcagatgcacccaaaacgtttgagggatattattatctaacaaa 2289
Query: 361 agggtgaagtaagaagaaacctgtctttaaaacttatacacacagtgtactatcacacac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2288 agggtgaagtaagaagaaacctgtctttaaaacttatacacacagtgtactatcacacac 2229
Query: 421 gagtctaaacataatcagagaaatatatagaaaagataatgtgtgaaaaagcaagcacat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2228 gagtctaaacataatcagagaaatatatagaaaagataatgtgtgaaaaagcaagcacat 2169
Query: 481 agattaattggtttttatttcacttaactcataaacttagggatgggaattaggacatgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2168 agattaattggtttttatttcacttaactcataaacttagggatgggaattaggacatgc 2109
Query: 541 aatcagtttcaaacggatggactctgtttaatccaacttgatcctgacggccttgatttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2108 aatcagtttcaaacggatggactctgtttaatccaacttgatcctgacggccttgatttg 2049
Query: 601 agtgtaagattcgaaagcttcttcacccatttctctaccgtaaccagattgcttgtmacc 660
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2048 agtgtaagattcgaaagcttcttcacccatttctctaccgtaaccagattgcttgtaacc 1989
Query: 661 accgaatggaacggcagcgtcgaaatcgttgtaagtgttgatccagacggtaccagcttt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1988 accgaatggaacggcagcgtcgaaatcgttgtaagtgttgatccagacggtaccagcttt 1929
Query: 721 tagtctctttgcgaccttcaaggcaacggagatgttttcagtttcgataccagcacccaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1928 tagtctctttgcgaccttcaaggcaacggagatgttttcagtttcgataccagcacccaa 1869
Query: 781 accgaattcggagtcgttagccaaagcgacactttcgtcgacagtagagaacttggagat 840
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1868 accgaattcggagtcgttagccaaagcgacagcttcgtcgacagtagagaacttggagat 1809
Query: 841 ggtgacgacaggaccaaagatttcttccttgacgattctcatatcttccttaacgttgta 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1808 ggtgacgacaggaccaaagatttcttccttgacgattctcatatcttccttaacgttgta 1749
Query: 901 gaatacagttggtttaatgaagtaa-ccttgttgcctactctttca-caacagtcaagat 958
||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||
Sbjct: 1748 gaatacagttggtttaatgaagtaacccttgttgcctactctttcaccaccagtcaagat 1689
Query: 959 agaag 963
|||||
Sbjct: 1688 agaag 1684
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7171
Number of Sequences: 1807
Number of extensions: 7171
Number of successful extensions: 57
Number of sequences better than 1.0e-20: 1
length of query: 964
length of database: 10,358,551
effective HSP length: 16
effective length of query: 948
effective length of database: 10,329,639
effective search space: 9792497772
effective search space used: 9792497772
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)